Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCGGCGGGAGCTGCAGA
((((((((.(.(((((..((.&)).))))).).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282941
GeneSymbolRTKN2
Binding site36,56
Score0.846
Seed1
Au0.25
Energy-23.7
Binding len20
Me-7.819
Phylopstem2.4358922499999998
Phylopflank2.308687698648648
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure