Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCCTCATCACTGCCAGGG
.(((((((....(((..((((.&))))..)))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282948
GeneSymbolJMJD1C
Binding site267,287
Score0.923
Seed1
Au0.515
Energy-17.1
Binding len20
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure