Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCATTTGCCAGGA
.(((((((...((((.(((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282948
GeneSymbolJMJD1C
Binding site7148,7163
Score0.923
Seed1
Au0.559
Energy-16.4
Binding len15
Me-9.15
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure