Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCGGCAGCAGCT
..((.(((((.(((((((((.&))))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282948
GeneSymbolJMJD1C
Binding site3622,3641
Score1.0
Seed0
Au0.559
Energy-27.6
Binding len19
Me-11.901
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure