Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATACAATGACGCCGCTGCAAG
(((((((.((((((((((((.&))).))))))..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282948
GeneSymbolJMJD1C
Binding site378,402
Score0.846
Seed1
Au0.515
Energy-23.2
Binding len24
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure