Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCAGCTGCTCTGTGGA
((((((..(((((((..(((.&)))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282949
GeneSymbolCOPS7B
Binding site2329,2349
Score0.808
Seed0
Au0.559
Energy-19.6
Binding len20
Me-8.028
Phylopstem0.01557242857142857
Phylopflank0.35385478875
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure