Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCAGCTGCTCTGTGGA
((((((..(((((((..(((.&)))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282951
GeneSymbolCOPS7B
Binding site2342,2362
Score0.808
Seed0
Au0.559
Energy-19.6
Binding len20
Me-8.028
Phylopstem-0.6314308971428572
Phylopflank0.13911679024999993
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure