Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCACACCCTTCTTTGATCTGCTGCAGCACCGGTACCTGCAGCTGTGGG
((((((((((((..(((.(((&.)))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282957
GeneSymbolCFAP77
Binding site585,638
Score0.923
Seed1
Au0.441
Energy-21.7
Binding len22
Me-6.084
Phylopstem2.4459355666666664
Phylopflank1.7908611875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure