Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAGCCACAGCGCC
..((.((((.((((((.(((.&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282963
GeneSymbolHJURP
Binding site2752,2769
Score0.846
Seed0
Au0.426
Energy-20.9
Binding len17
Me-10.319
Phylopstem0.25883133333333336
Phylopflank1.0746044042500003
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure