Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCAGCTGCC
..(((((((((((.((.....&)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282964
GeneSymbolSLA
Binding site377,392
Score0.923
Seed1
Au0.397
Energy-22.9
Binding len15
Me-5.814
Phylopstem-0.2840938
Phylopflank-0.44672392250000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure