Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTCAATGCTAGGG
.((((((((....((.((((((&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001282971
GeneSymbolMTSS1
Binding site1155,1172
Score0.846
Seed1
Au0.515
Energy-15.6
Binding len17
Me-12.73
Phylopstem1.4029314999999998
Phylopflank2.1351079225
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure