Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTAGCCGTGGTGCAGG
(((((.(((((((((.((((.&)))).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364128
GeneSymbolCTNND2
Binding site152,172
Score0.846
Seed0
Au0.412
Energy-22.2
Binding len20
Me-6.072
Phylopstem0.27802526666666666
Phylopflank0.83536926125
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure