Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGGCATTGTGTGTACATCTGCAGTTTTGCAT
.(((((((((((.((((((((&)))).............)))).)))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001282985
GeneSymbolTRIB1
Binding site1908,1944
Score0.846
Seed1
Au0.574
Energy-19.6
Binding len36
Me-5.082
Phylopstem0.7862017692307692
Phylopflank0.20438862749999998
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure