Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCCACCAAGAAGAACGTGGCTGGCAGC
((((((((((((((((.....&)))))).............))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001283017
GeneSymbolNUDT13
Binding site605,636
Score0.846
Seed1
Au0.485
Energy-16.1
Binding len31
Me-3.938
Phylopstem1.5037150533333334
Phylopflank3.155909486125
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end3
Position5UTR
2D Structure