Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGGGGCAGCGGCTGCAGG
((((((((((.(((.((....&)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001283053
GeneSymbolSTMN4
Binding site1230,1248
Score0.923
Seed1
Au0.324
Energy-21.3
Binding len18
Me-7.498
Phylopstem0.9172546999999998
Phylopflank0.2920089262500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure