Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGCGGCTCTCCAAG
(((.((((((((((.......&))))))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284
GeneSymbolAP3S1
Binding site140,157
Score1.0
Seed0
Au0.485
Energy-17.6
Binding len17
Me-7.938
Phylopstem3.0412223999999997
Phylopflank4.204022009999999
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end1
PositionCDS
2D Structure