Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGCGCGCTGTCTGCGGCGAAATGCCAGGTC
(((((((((....(((((((..&.))))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001284201
GeneSymbolJKAMP
Binding site273,305
Score0.846
Seed1
Au0.456
Energy-22.5
Binding len23
Me-12.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure