Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAACTGATGGCTT
....(((((((((((((((((&)))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284202
GeneSymbolJKAMP
Binding site1914,1933
Score0.923
Seed0
Au0.691
Energy-19.6
Binding len19
Me-9.547
Phylopstem-0.3665144155555556
Phylopflank0.13239147974999999
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure