Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTAGCAGGTGCTGCAGCTGTAC
.(((((((((((((((.((((&)))).)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284215
GeneSymbolTRIP12
Binding site9209,9233
Score0.808
Seed1
Au0.412
Energy-24.0
Binding len24
Me-3.793
Phylopstem6.052431555555554
Phylopflank5.819298775
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure