Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTGGGACAGCCACAGCTGCC
..(((((((.((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284215
GeneSymbolTRIP12
Binding site3159,3182
Score0.923
Seed1
Au0.426
Energy-23.6
Binding len16
Me-6.2
Phylopstem0.30351928571428566
Phylopflank1.21663327625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure