Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTGGGACAGCCACAGCTGCC
..(((((((.((((((.....&.)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284216
GeneSymbolTRIP12
Binding site2250,2273
Score0.923
Seed1
Au0.426
Energy-23.6
Binding len16
Me-6.2
Phylopstem4.105287142857143
Phylopflank0.7136640395
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure