Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGGCCCCTGCAGCTGCAGC
((((((((((((..((..(((&)))....))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284223
GeneSymbolLRIT2
Binding site1554,1578
Score0.923
Seed1
Au0.309
Energy-23.7
Binding len24
Me-6.084
Phylopstem0.13438761666666668
Phylopflank0.20461189749999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure