Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCCAGGA
.(((((((((............&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001284231
GeneSymbolMAP3K9
Binding site927,937
Score0.923
Seed1
Au0.412
Energy-15.7
Binding len10
Me-13.079
Phylopstem-0.12244087777777778
Phylopflank0.09831362125000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure