Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACCTAGGTTGCCAGGTT
((((((((..(...(((((...&)))))...)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001284234
GeneSymbolGTDC1
Binding site1790,1810
Score0.846
Seed1
Au0.485
Energy-21.1
Binding len20
Me-11.729
Phylopstem3.3072524999999993
Phylopflank1.449680673375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure