Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACCTAGGTTGCCAGGTT
((((((((..(...(((((...&)))))...)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001284238
GeneSymbolGTDC1
Binding site2289,2309
Score0.846
Seed1
Au0.485
Energy-21.1
Binding len20
Me-11.729
Phylopstem2.24221975
Phylopflank2.0749588825000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure