Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTTGCGGCTGCAGCTCTGCAGT
((((((((((((((((((((.&)).))))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284239
GeneSymbolSARAF
Binding site115,139
Score0.846
Seed1
Au0.279
Energy-26.4
Binding len24
Me-3.938
Phylopstem0.6995306865217392
Phylopflank0.6380066648749998
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end7
Position5UTR
2D Structure