Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAAGGAGAATGTTTGTTTTGAGCAGCTGA
...(((((((..(((((((((&)))))))))..................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284240
GeneSymbolCCSER2
Binding site5134,5169
Score0.923
Seed0
Au0.632
Energy-21.9
Binding len35
Me-12.686
Phylopstem0.22265133333333337
Phylopflank0.3466537062500001
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end8
Position3UTR
2D Structure