Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGGAATTGCTGGGC
.(((((((.....((((((...&)))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001284263
GeneSymbolCCDC117
Binding site3046,3065
Score1.0
Seed1
Au0.574
Energy-17.6
Binding len19
Me-13.553
Phylopstem-0.08639928571428572
Phylopflank0.2277455675
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure