Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GTTTTGGCAGTAGCTGTGGCTGCGG
.((((((((((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284263
GeneSymbolCCDC117
Binding site68,93
Score0.923
Seed1
Au0.25
Energy-20.8
Binding len16
Me-4.026
Phylopstem1.3753788571428571
Phylopflank1.1620488475
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure