Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGCACGCAGCCAGCAAG
((((.(((((((((((..(((&)))))))).))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284263
GeneSymbolCCDC117
Binding site2037,2059
Score1.0
Seed0
Au0.559
Energy-21.8
Binding len22
Me-8.057
Phylopstem-0.15457563333333332
Phylopflank0.2119094925
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure