Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGCACGCAGCCAGCAAG
((((.(((((((((((..(((&)))))))).))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284264
GeneSymbolCCDC117
Binding site1866,1888
Score1.0
Seed0
Au0.559
Energy-21.8
Binding len22
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure