Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCTGCCAGCAGCC
.....((((((((...((((.&))))...))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284266
GeneSymbolEFCAB11
Binding site1308,1325
Score0.846
Seed0
Au0.588
Energy-17.0
Binding len17
Me-15.491
Phylopstem0.6677164333333333
Phylopflank0.5243593825
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure