Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGATCCTGGAGCTGCAGG
((((((((.(((.........&.))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284268
GeneSymbolEFCAB11
Binding site88,108
Score1.0
Seed1
Au0.382
Energy-17.9
Binding len14
Me-8.108
Phylopstem-0.4268654999999999
Phylopflank0.0014834422499999667
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure