Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCAATGGTGCCAGT
..(((((((.....((((....&)))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001284269
GeneSymbolEFCAB11
Binding site1103,1120
Score0.846
Seed1
Au0.515
Energy-15.6
Binding len17
Me-14.517
Phylopstem-0.13391115285714286
Phylopflank0.22805681725000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure