Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGAGCTGCTCAGCTGCC
..((((((((((((.((((((&))))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284269
GeneSymbolEFCAB11
Binding site1775,1796
Score0.923
Seed1
Au0.426
Energy-23.3
Binding len21
Me-5.692
Phylopstem-0.5995416428571428
Phylopflank-0.23486471049999996
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure