Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGCCACTGCAGCTTGTAAT
(((((((((((((.((.((((&)))))).))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284271
GeneSymbolASCC3
Binding site684,706
Score0.885
Seed1
Au0.588
Energy-20.5
Binding len22
Me-4.794
Phylopstem4.797644785714286
Phylopflank5.6939907365
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure