Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCATTCGTTATTTCTGTAGCTGCAAA
((((((((((((..((((.(.&.).))))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284274
GeneSymbolHECTD2
Binding site1218,1246
Score0.846
Seed1
Au0.618
Energy-23.9
Binding len22
Me-6.084
Phylopstem4.728697
Phylopflank5.698503262500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure