Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCTTCGTCAAGAAGGAGCTGCAGCTGCAGG
((((((((((((((.(.....&.).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284276
GeneSymbolSERPINA9
Binding site188,222
Score0.846
Seed1
Au0.471
Energy-25.3
Binding len18
Me-4.673
Phylopstem-0.08055949285714285
Phylopflank-0.29616737499999995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure