Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTGGTATCGGCGGCAGCTGTGAG
((((((((((.((((......&.)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284277
GeneSymbolPITPNB
Binding site25,51
Score0.923
Seed1
Au0.309
Energy-21.4
Binding len17
Me-6.995
Phylopstem2.8765867999999997
Phylopflank2.96322723452381
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure