Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGGGAATGCAGTTGCAAG
(((((((((((.((.((.(((&))).)).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284282
GeneSymbolVOPP1
Binding site2126,2148
Score1.0
Seed1
Au0.471
Energy-21.7
Binding len22
Me-8.02
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure