Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCTCTCTGAGGTTGTGTTGGGTCTAAGCGGGTGTGTGCTGGGC
.(((((((((((.(((((((((&.))))))..)))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001284283
GeneSymbolVOPP1
Binding site1529,1575
Score0.846
Seed1
Au0.426
Energy-20.5
Binding len26
Me-5.082
Phylopstem-0.24144418181818186
Phylopflank-0.21903493549999997
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure