Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGGGAATGCAGTTGCAAG
(((((((((((.((.((.(((&))).)).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284283
GeneSymbolVOPP1
Binding site2067,2089
Score1.0
Seed1
Au0.471
Energy-21.7
Binding len22
Me-8.02
Phylopstem0.5503090218181819
Phylopflank0.7904655465000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure