Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCTGCAGCGGCGGA
((((.(((((((((((.....&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284295
GeneSymbolCHPF2
Binding site34,51
Score0.846
Seed0
Au0.235
Energy-22.6
Binding len17
Me-8.057
Phylopstem0.3555229181818181
Phylopflank0.6039163441666666
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
Position5UTR
2D Structure