Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTAATCCCAGCTGCT
..(((((((.(((((..((((&)))).))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284306
GeneSymbolZNF106
Binding site4957,4976
Score0.846
Seed1
Au0.382
Energy-21.4
Binding len19
Me-6.433
Phylopstem3.632687757142857
Phylopflank5.20630681375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure