Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACCACTGAGCAGCTGTAC
.((((((((((((.((.((((&)))))).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284320
GeneSymbolOPALIN
Binding site1071,1093
Score0.923
Seed1
Au0.574
Energy-21.4
Binding len22
Me-4.65
Phylopstem0.020159757142857115
Phylopflank-0.20708653785
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure