Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCACGTGTTGG
...((((.((((((((((((.&))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284326
GeneSymbolOPALIN
Binding site21,39
Score0.846
Seed0
Au0.441
Energy-20.1
Binding len18
Me-8.828
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
Position5UTR
2D Structure