Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCGGCTGA
...((((((((((........&)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284336
GeneSymbolEIF3J
Binding site1198,1209
Score0.923
Seed0
Au0.662
Energy-17.0
Binding len11
Me-8.34
Phylopstem2.6601491
Phylopflank2.4406753925
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure