Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACATCCCCCTCAACAGAAGCAAGCTCAACCGCAGGAAGAAGATGAAGCTGCAGG
(((((((((((((((......&.)))))))).............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284337
GeneSymbolRRP12
Binding site3562,3620
Score1.0
Seed1
Au0.441
Energy-21.3
Binding len30
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end2
PositionCDS
2D Structure