Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGTGCAGCTGCT
..(((((((((..((((....&)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284338
GeneSymbolNEDD4
Binding site220,235
Score1.0
Seed1
Au0.574
Energy-20.4
Binding len15
Me-9.593
Phylopstem0.4946441888888889
Phylopflank0.8441240575
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure