Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGTCAGCTGCGGTGTGGGATGCTGGAGTTTGGCTGCAGGCTGACATCATTTATTTTTGCATCCCTGTCTG
(((((((((((((((((((((&.)))).))))...........)))))))))..........................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001284390
GeneSymbolVGLL4
Binding site2203,2276
Score1.0
Seed1
Au0.485
Energy-26.7
Binding len61
Me-3.938
Phylopstem3.177018911864407
Phylopflank1.1304737912499998
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end8
Position3UTR
2D Structure